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자생머루 Resequencing
year raw data read # total SNP # (ref.) homotype SNP # heterotype SNP #
2011 Meoroo
(Vitis coignetia)
173,099,656 5,309,505 4,396,624 912,881
Saemuroo
(Vitis flexuosa)
418,833,328 5,543,658 3,743,186 1,800,472
Wangmuroo
(Vitis amurensis)
157,422,832 5,153,856 4,095,185 1,058,671
2012 Meoroo
(Vitis coignetia)
132,547,978 4,865,155 3,932,645 932,510
Saemuroo
(Vitis flexuosa)
133,344,694 4,723,472 3,883,372 840,100
Wangmuroo
(Vitis amurensis)
155,855,936 5,046,320 3,959,032 1,087,288

De novo assembly
raw data read # avg. read length length (bp) trimmed read # trimmed avg. read length trimmed length (bp)
Saemuroo 200bp 127,188,880 101 12,846,076,880 115,568,744 84.95 9,818,702,366
Saemuroo 500 418,833,328 101 42,302,166,128 284,182,234 80.2 22,792,040,572
Saemuroo 2kb 176,096,806 101 17,785,777,406 147,415,748 83.6 12,324,295,540
Saemuroo 5kb 153,313,768 101 15,484,690,568 115,520,514 83 9,595,357,574